ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 142.00 0.38 1.44 100.0 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 1748.32 4.66 17.75 68.67 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 1807.00 4.82 18.34 77.06 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 761.83 2.03 7.73 42.61 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 54.00 2.61 0.55 100.0 SNORD104-201 snoRNA OCI-LY7 (Cell line)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 64.00 3.10 0.65 100.0 SNORD104-201 snoRNA OCI-LY7 (Cell line)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 1541.00 21.64 15.64 87.26 RNA5SP358-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 44.00 0.05 0.45 95.65 RNA5SP145-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 4.00 0.83 0.04 100.0 Y_RNA.105-201 misc RNA OCI-LY7 (Cell line)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 45.00 11.45 0.46 100.0 RNY4P9-201 misc RNA OCI-LY7 (Cell line)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 269.00 1.21 2.73 100.0 RNU5B-1-201 snRNA OCI-LY7 (Cell line)
ENST00000363286.1 ENST00000363286.1_1_69_+ 1–69 12167.00 54.92 123.51 100.0 RNU5B-1-201 snRNA OCI-LY7 (Cell line)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 137.00 0.62 1.39 100.0 RNU5B-1-201 snRNA OCI-LY7 (Cell line)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 59.00 0.27 0.60 100.0 RNU5B-1-201 snRNA OCI-LY7 (Cell line)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 288.00 1.30 2.92 47.37 RNU5B-1-201 snRNA OCI-LY7 (Cell line)
ENST00000363286.1 ENST00000363286.1_1_86_+ 1–86 1152.00 5.20 11.69 100.0 RNU5B-1-201 snRNA OCI-LY7 (Cell line)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 768.00 43.44 7.80 97.83 RNY4P27-201 misc RNA OCI-LY7 (Cell line)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 44.00 2.49 0.45 72.13 RNY4P27-201 misc RNA OCI-LY7 (Cell line)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 91.00 6.52 0.92 100.0 Y_RNA.136-201 misc RNA OCI-LY7 (Cell line)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 1.00 100.00 0.01 100.0 SNORD113-7-201 snoRNA OCI-LY7 (Cell line)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 27.00 8.57 0.27 100.0 Y_RNA.181-201 misc RNA OCI-LY7 (Cell line)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 376.11 3.51 3.82 9.86 RNY1-201 misc RNA OCI-LY7 (Cell line)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 2626.31 24.52 26.66 70.26 RNY1-201 misc RNA OCI-LY7 (Cell line)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 141.00 1.32 1.43 100.0 RNY1-201 misc RNA OCI-LY7 (Cell line)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 29.00 0.27 0.29 100.0 RNY1-201 misc RNA OCI-LY7 (Cell line)