ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 31.00 0.41 0.31 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 326.00 6.51 3.31 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 629.00 69.81 6.38 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 36.00 4.11 0.37 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 45.00 0.76 0.46 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 887.00 14.94 9.00 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 711.00 11.98 7.22 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA OCI-LY7 (Cell line)