ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 6783.00 18.81 68.85 97.39 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 379.00 12.34 3.85 35.69 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 89.00 96.74 0.90 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 11.00 6.36 0.11 100.0 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 1357.00 35.71 13.77 68.09 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 220.00 5.79 2.23 55.56 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 176.00 4.63 1.79 44.44 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 12.00 4.24 0.12 75.0 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 44.67 15.78 0.45 62.91 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 37.72 13.33 0.38 47.15 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 974.00 79.77 9.89 91.46 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 6.00 3.45 0.06 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 317.00 16.04 3.22 70.6 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 327.00 6.53 3.32 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 309.00 0.77 3.14 58.08 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 16.00 12.90 0.16 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 131.00 17.19 1.33 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 2907.00 45.05 29.51 82.56 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 145.00 3.50 1.47 42.15 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 4.00 5.41 0.04 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 2.00 0.94 0.02 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 3.00 0.48 0.03 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 33.00 24.81 0.33 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 15.00 55.56 0.15 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 4806.00 64.11 48.79 93.89 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA OCI-LY7 (Cell line)