ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 1052.00 35.14 10.68 89.23 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 115.00 3.84 1.17 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 84.00 5.00 0.85 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 582.00 18.87 5.91 74.62 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 17.00 1.14 0.17 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 32.00 1.43 0.32 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 1468.00 65.71 14.90 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 170.00 0.47 1.73 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 30.00 41.10 0.30 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 61.00 19.49 0.62 89.71 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 4.00 1.28 0.04 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 7.00 2.24 0.07 10.29 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 260.00 23.11 2.64 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 12.00 1.07 0.12 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 19.00 14.07 0.19 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 24.00 61.54 0.24 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 2.00 5.26 0.02 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 14.00 0.18 0.14 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 1.00 0.01 0.01 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 61.00 0.80 0.62 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 16.00 0.21 0.16 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 60.00 0.79 0.61 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 65.00 0.85 0.66 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 2.00 0.01 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 3.00 0.01 0.03 75.0 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA OCI-LY7 (Cell line)