ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 17469.00 89.27 177.33 97.29 MIR181A1HG-212 lncRNA OCI-LY7 (Cell line)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 82.00 0.42 0.83 100.0 MIR181A1HG-212 lncRNA OCI-LY7 (Cell line)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 827.00 31.69 8.39 100.0 C19orf48P-218 lncRNA OCI-LY7 (Cell line)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 1160.00 44.44 11.78 100.0 C19orf48P-218 lncRNA OCI-LY7 (Cell line)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 49.00 20.68 0.50 100.0 ENST00000817026 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 745.90 3.61 7.57 38.33 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 249.00 1.20 2.53 100.0 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 1365.32 6.60 13.86 54.18 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 771.31 3.73 7.83 42.95 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 138.00 0.67 1.40 100.0 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 3040.00 14.70 30.86 98.86 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 1028.41 4.97 10.44 27.89 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 270.00 1.31 2.74 86.82 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 1218.13 5.89 12.37 42.59 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 1476.43 7.14 14.99 75.6 ENST00000823801 lncRNA OCI-LY7 (Cell line)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 463.00 0.67 4.70 100.0 GAS5-377 lncRNA OCI-LY7 (Cell line)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 13106.00 18.84 133.04 100.0 GAS5-377 lncRNA OCI-LY7 (Cell line)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 104.00 0.15 1.06 100.0 GAS5-377 lncRNA OCI-LY7 (Cell line)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 53449.00 76.82 542.56 100.0 GAS5-377 lncRNA OCI-LY7 (Cell line)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 1433.00 26.85 14.55 100.0 TAF12-DT-204 lncRNA OCI-LY7 (Cell line)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 108685.00 93.64 1103.26 99.11 ZFAS1-238 lncRNA OCI-LY7 (Cell line)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 132.00 0.11 1.34 100.0 ZFAS1-238 lncRNA OCI-LY7 (Cell line)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 336.00 0.29 3.41 100.0 ZFAS1-238 lncRNA OCI-LY7 (Cell line)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 941.00 0.81 9.55 100.0 ZFAS1-238 lncRNA OCI-LY7 (Cell line)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 704.00 4.45 7.15 100.0 ZFAS1-242 lncRNA OCI-LY7 (Cell line)