ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 59.00 2.10 0.60 100.0 ENST00000772672 lncRNA OCI-LY7 (Cell line)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 1373.00 48.90 13.94 100.0 ENST00000772672 lncRNA OCI-LY7 (Cell line)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 2.00 0.07 0.02 100.0 ENST00000772672 lncRNA OCI-LY7 (Cell line)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 73.00 31.33 0.74 100.0 ENST00000773843 lncRNA OCI-LY7 (Cell line)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 70462.00 22.39 715.26 80.19 SNHG12-223 lncRNA OCI-LY7 (Cell line)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 147.00 0.05 1.49 100.0 SNHG12-223 lncRNA OCI-LY7 (Cell line)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 242065.00 76.93 2457.20 98.29 SNHG12-223 lncRNA OCI-LY7 (Cell line)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 355.97 0.03 3.61 64.84 SNHG25-206 lncRNA OCI-LY7 (Cell line)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 1202.00 0.09 12.20 100.0 SNHG25-206 lncRNA OCI-LY7 (Cell line)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 1193626.00 93.04 12116.49 94.05 SNHG25-206 lncRNA OCI-LY7 (Cell line)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 63.00 0.00 0.64 100.0 SNHG25-206 lncRNA OCI-LY7 (Cell line)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 149.30 0.01 1.52 52.57 SNHG25-206 lncRNA OCI-LY7 (Cell line)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 213.83 0.02 2.17 28.36 SNHG25-206 lncRNA OCI-LY7 (Cell line)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 3237.00 0.25 32.86 98.06 SNHG25-206 lncRNA OCI-LY7 (Cell line)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 169.00 0.01 1.72 100.0 SNHG25-206 lncRNA OCI-LY7 (Cell line)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 1.00 50.00 0.01 100.0 ENST00000778783 lncRNA OCI-LY7 (Cell line)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 107.00 90.68 1.09 97.27 MIR155HG-205 lncRNA OCI-LY7 (Cell line)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 2110.00 52.76 21.42 100.0 ENST00000785178 lncRNA OCI-LY7 (Cell line)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 55.00 7.80 0.56 39.29 ENST00000786284 lncRNA OCI-LY7 (Cell line)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 169.00 23.97 1.72 100.0 ENST00000786284 lncRNA OCI-LY7 (Cell line)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 85.00 12.06 0.86 73.91 ENST00000786284 lncRNA OCI-LY7 (Cell line)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 38423.00 82.87 390.03 92.15 ENST00000788343 lncRNA OCI-LY7 (Cell line)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 864.60 11.96 8.78 26.23 ENST00000797550 lncRNA OCI-LY7 (Cell line)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 1802.05 24.93 18.29 54.67 ENST00000797550 lncRNA OCI-LY7 (Cell line)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 1430.00 19.78 14.52 87.78 ENST00000797550 lncRNA OCI-LY7 (Cell line)