ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 39562.00 93.78 401.59 98.05 SNHG32-227 lncRNA OCI-LY7 (Cell line)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 184.00 0.44 1.87 100.0 SNHG32-227 lncRNA OCI-LY7 (Cell line)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 137.00 0.32 1.39 100.0 SNHG32-227 lncRNA OCI-LY7 (Cell line)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 71.00 62.83 0.72 100.0 B4GALT1-203 nonsense mediated decay OCI-LY7 (Cell line)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 18.00 0.72 0.18 100.0 ENST00000722183 lncRNA OCI-LY7 (Cell line)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 168.00 6.76 1.71 81.95 ENST00000722183 lncRNA OCI-LY7 (Cell line)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 330.00 13.29 3.35 100.0 ENST00000722183 lncRNA OCI-LY7 (Cell line)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 36.00 70.59 0.37 94.74 THBS3-AS1-228 lncRNA OCI-LY7 (Cell line)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 2.00 33.33 0.02 100.0 MIR200CHG-202 lncRNA OCI-LY7 (Cell line)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 56.00 2.21 0.57 100.0 SNHG16-266 lncRNA OCI-LY7 (Cell line)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 220.00 8.69 2.23 100.0 SNHG16-266 lncRNA OCI-LY7 (Cell line)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 313.00 12.36 3.18 100.0 SNHG16-266 lncRNA OCI-LY7 (Cell line)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 154.00 6.08 1.56 100.0 SNHG16-266 lncRNA OCI-LY7 (Cell line)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 235.00 61.20 2.39 100.0 NR2F2-AS1-327 lncRNA OCI-LY7 (Cell line)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 38.00 4.54 0.39 45.24 ENST00000747675 lncRNA OCI-LY7 (Cell line)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 46.00 5.50 0.47 38.66 ENST00000747675 lncRNA OCI-LY7 (Cell line)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 238.00 28.43 2.42 100.0 ENST00000747675 lncRNA OCI-LY7 (Cell line)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 35.00 4.18 0.36 43.21 ENST00000747675 lncRNA OCI-LY7 (Cell line)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 128.00 15.29 1.30 100.0 ENST00000747675 lncRNA OCI-LY7 (Cell line)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 7447.00 55.19 75.59 93.37 SNHG26-250 lncRNA OCI-LY7 (Cell line)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 141.00 1.04 1.43 14.36 SNHG26-250 lncRNA OCI-LY7 (Cell line)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 35.00 3.80 0.36 100.0 LINC02422-207 lncRNA OCI-LY7 (Cell line)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 11.00 1.92 0.11 100.0 ENST00000753088 lncRNA OCI-LY7 (Cell line)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 14.00 2.45 0.14 100.0 ENST00000753088 lncRNA OCI-LY7 (Cell line)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 1403.68 17.65 14.25 86.75 ENST00000756336 lncRNA OCI-LY7 (Cell line)