ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 32.00 2.26 0.32 43.84 CTC1-214 protein coding OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 23891.00 81.17 242.52 99.5 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 346.00 1.18 3.51 100.0 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 241.00 0.82 2.45 27.54 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 190.00 0.65 1.93 100.0 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 76.00 0.26 0.77 83.52 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 520.00 1.77 5.28 99.24 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 174.00 0.59 1.77 10.99 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 20.00 0.07 0.20 100.0 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 60.00 0.20 0.61 100.0 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 583.00 1.98 5.92 100.0 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 44.00 0.15 0.45 100.0 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 271.00 0.92 2.75 100.0 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 292.00 8.18 2.96 100.0 MIRLET7A1HG-203 lncRNA OCI-LY7 (Cell line)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 118.00 0.08 1.20 100.0 SNHG29-232 lncRNA OCI-LY7 (Cell line)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 131612.00 90.94 1335.99 100.0 SNHG29-232 lncRNA OCI-LY7 (Cell line)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 17.00 0.01 0.17 100.0 SNHG29-232 lncRNA OCI-LY7 (Cell line)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 5.00 0.00 0.05 100.0 SNHG29-232 lncRNA OCI-LY7 (Cell line)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 5615.00 3.88 57.00 100.0 SNHG29-232 lncRNA OCI-LY7 (Cell line)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 3368.00 2.33 34.19 100.0 SNHG29-232 lncRNA OCI-LY7 (Cell line)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 1.00 20.00 0.01 100.0 SNHG14-234 lncRNA OCI-LY7 (Cell line)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 1.00 20.00 0.01 100.0 SNHG14-234 lncRNA OCI-LY7 (Cell line)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 1.00 20.00 0.01 100.0 SNHG14-234 lncRNA OCI-LY7 (Cell line)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 164.00 6.57 1.66 31.3 ENST00000655317 lncRNA OCI-LY7 (Cell line)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 600.00 24.05 6.09 100.0 ENST00000655317 lncRNA OCI-LY7 (Cell line)