ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 377.00 1.78 3.83 100.0 NOP56-219 retained intron OCI-LY7 (Cell line)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 13957.00 66.02 141.68 99.09 NOP56-219 retained intron OCI-LY7 (Cell line)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 723.00 0.80 7.34 40.64 RNA5-8SN2-201 rRNA OCI-LY7 (Cell line)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 122.31 0.14 1.24 51.18 RNA5-8SN2-201 rRNA OCI-LY7 (Cell line)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 2005.00 2.22 20.35 100.0 RNA5-8SN2-201 rRNA OCI-LY7 (Cell line)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 210.00 0.23 2.13 100.0 RNA5-8SN2-201 rRNA OCI-LY7 (Cell line)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 996.00 1.10 10.11 100.0 RNA5-8SN2-201 rRNA OCI-LY7 (Cell line)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 1887.00 2.09 19.15 72.3 RNA5-8SN2-201 rRNA OCI-LY7 (Cell line)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 119.39 0.13 1.21 49.95 RNA5-8SN2-201 rRNA OCI-LY7 (Cell line)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 10.00 83.33 0.10 100.0 MIR7974-201 miRNA OCI-LY7 (Cell line)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 591.00 0.09 6.00 100.0 U2.3-201 snRNA OCI-LY7 (Cell line)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 6779.34 1.01 68.82 48.86 U2.3-201 snRNA OCI-LY7 (Cell line)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 448233.00 66.74 4550.01 99.35 U2.3-201 snRNA OCI-LY7 (Cell line)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 15.00 0.00 0.15 100.0 U2.3-201 snRNA OCI-LY7 (Cell line)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 28671.00 4.27 291.04 48.17 U2.3-201 snRNA OCI-LY7 (Cell line)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 22914.00 3.41 232.60 53.68 U2.3-201 snRNA OCI-LY7 (Cell line)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 20120.00 3.00 204.24 91.95 U2.3-201 snRNA OCI-LY7 (Cell line)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 5414.04 0.81 54.96 39.02 U2.3-201 snRNA OCI-LY7 (Cell line)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 158.00 0.02 1.60 100.0 U2.3-201 snRNA OCI-LY7 (Cell line)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 736.00 0.11 7.47 100.0 U2.3-201 snRNA OCI-LY7 (Cell line)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 3146.00 0.47 31.94 100.0 U2.3-201 snRNA OCI-LY7 (Cell line)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 875.00 0.13 8.88 100.0 U2.3-201 snRNA OCI-LY7 (Cell line)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 11406.12 1.70 115.78 56.05 U2.3-201 snRNA OCI-LY7 (Cell line)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 9474.55 1.41 96.18 48.31 U2.3-201 snRNA OCI-LY7 (Cell line)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 157.00 0.02 1.59 100.0 U2.6-201 snRNA OCI-LY7 (Cell line)