ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 17895.00 79.42 181.65 100.0 RPL4-207 retained intron OCI-LY7 (Cell line)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 438.00 1.94 4.45 100.0 RPL4-207 retained intron OCI-LY7 (Cell line)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 580.00 15.93 5.89 81.92 ENST00000565336 lncRNA OCI-LY7 (Cell line)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 334.00 9.17 3.39 84.34 ENST00000565336 lncRNA OCI-LY7 (Cell line)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 2991.00 5.71 30.36 100.0 RBMX-210 retained intron OCI-LY7 (Cell line)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 78.00 0.15 0.79 100.0 RBMX-210 retained intron OCI-LY7 (Cell line)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 789.00 1.51 8.01 100.0 RBMX-210 retained intron OCI-LY7 (Cell line)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 46202.00 88.22 469.00 99.49 RBMX-210 retained intron OCI-LY7 (Cell line)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 1854.00 41.80 18.82 100.0 RPL4-214 retained intron OCI-LY7 (Cell line)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 253.00 5.70 2.57 100.0 RPL4-214 retained intron OCI-LY7 (Cell line)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 580.78 22.49 5.90 52.13 POLG-DT-202 lncRNA OCI-LY7 (Cell line)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 606.42 23.49 6.16 71.68 POLG-DT-202 lncRNA OCI-LY7 (Cell line)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 39.00 1.51 0.40 100.0 POLG-DT-202 lncRNA OCI-LY7 (Cell line)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 127.00 23.13 1.29 100.0 ENST00000570843 lncRNA OCI-LY7 (Cell line)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 137.00 93.84 1.39 97.16 MIR22HG-212 lncRNA OCI-LY7 (Cell line)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 14190.00 66.59 144.04 71.38 SNORD53B-201 snoRNA OCI-LY7 (Cell line)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 64.00 0.30 0.65 12.38 SNORD53B-201 snoRNA OCI-LY7 (Cell line)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 453.00 2.13 4.60 87.62 SNORD53B-201 snoRNA OCI-LY7 (Cell line)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 81.00 85.26 0.82 100.0 ENST00000578036 lncRNA OCI-LY7 (Cell line)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 4825.00 86.89 48.98 100.0 RPL23A-207 protein coding OCI-LY7 (Cell line)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 2.00 100.00 0.02 100.0 MIR744-201 miRNA OCI-LY7 (Cell line)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 48.00 82.76 0.49 100.0 MIR378C-201 miRNA OCI-LY7 (Cell line)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 2315.00 54.01 23.50 75.51 MIR142HG-201 lncRNA OCI-LY7 (Cell line)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 269.00 6.28 2.73 17.57 MIR142HG-201 lncRNA OCI-LY7 (Cell line)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 10.00 0.23 0.10 100.0 MIR142HG-201 lncRNA OCI-LY7 (Cell line)