ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 532.00 0.31 5.40 100.0 MT-TE-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 5106.00 2.96 51.83 100.0 MT-TE-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 1910.00 1.11 19.39 75.85 MT-TE-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 2759.00 1.60 28.01 73.75 MT-TE-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 982.00 0.57 9.97 58.42 MT-TE-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 5.00 0.02 0.05 100.0 MT-RNR1-201 Mt rRNA OCI-LY7 (Cell line)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 184.00 0.85 1.87 100.0 MT-RNR1-201 Mt rRNA OCI-LY7 (Cell line)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 17.00 85.00 0.17 100.0 MIR454-201 miRNA OCI-LY7 (Cell line)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 5.00 83.33 0.05 100.0 MIR501-201 miRNA OCI-LY7 (Cell line)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 226.00 88.98 2.29 100.0 MIR769-201 miRNA OCI-LY7 (Cell line)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 18.00 50.00 0.18 100.0 KRTAP19-1-201 protein coding OCI-LY7 (Cell line)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 1.00 100.00 0.01 100.0 MIR509-3-201 miRNA OCI-LY7 (Cell line)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 5.00 55.56 0.05 100.0 MIR301B-201 miRNA OCI-LY7 (Cell line)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 483.00 70.61 4.90 92.53 RNU1-82P-201 snRNA OCI-LY7 (Cell line)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 243.00 21.41 2.47 74.77 SNORD66-201 snoRNA OCI-LY7 (Cell line)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 52.00 4.58 0.53 100.0 SNORD66-201 snoRNA OCI-LY7 (Cell line)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 137.00 12.07 1.39 100.0 SNORD66-201 snoRNA OCI-LY7 (Cell line)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 65.00 5.73 0.66 100.0 SNORD66-201 snoRNA OCI-LY7 (Cell line)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 2.00 4.88 0.02 100.0 U3.17-201 snoRNA OCI-LY7 (Cell line)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 1402.00 67.18 14.23 100.0 SNORD17-201 snoRNA OCI-LY7 (Cell line)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 586.00 46.69 5.95 100.0 SNORD72-201 snoRNA OCI-LY7 (Cell line)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 485.00 65.10 4.92 100.0 SNORD70B-201 snoRNA OCI-LY7 (Cell line)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 1080.00 5.97 10.96 93.91 RNY4P18-201 misc RNA OCI-LY7 (Cell line)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 3451.00 30.14 35.03 100.0 SNORD90-201 snoRNA OCI-LY7 (Cell line)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 6545.00 57.17 66.44 85.54 SNORD90-201 snoRNA OCI-LY7 (Cell line)