ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 132.00 0.64 1.34 100.0 SNORD69-201 snoRNA OCI-LY7 (Cell line)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 160.00 0.78 1.62 100.0 SNORD69-201 snoRNA OCI-LY7 (Cell line)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 18890.00 91.51 191.75 100.0 SNORD69-201 snoRNA OCI-LY7 (Cell line)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 221.00 1.07 2.24 100.0 SNORD69-201 snoRNA OCI-LY7 (Cell line)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 1444.00 64.18 14.66 91.92 SNORD70-201 snoRNA OCI-LY7 (Cell line)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 166.00 4.40 1.69 100.0 B4GALNT2-202 protein coding OCI-LY7 (Cell line)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 2443.00 64.77 24.80 75.56 B4GALNT2-202 protein coding OCI-LY7 (Cell line)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 75.00 77.32 0.76 100.0 NDE1-202 protein coding OCI-LY7 (Cell line)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 5503.00 81.56 55.86 100.0 SNORD111-201 snoRNA OCI-LY7 (Cell line)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 2332.00 43.94 23.67 70.11 SNORD88A-201 snoRNA OCI-LY7 (Cell line)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 1.00 100.00 0.01 100.0 MIR548K-201 miRNA OCI-LY7 (Cell line)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 34.00 68.00 0.35 100.0 MIR320B2-201 miRNA OCI-LY7 (Cell line)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 607.00 5.52 6.16 100.0 SNORD100-201 snoRNA OCI-LY7 (Cell line)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 30.00 0.27 0.30 100.0 SNORD100-201 snoRNA OCI-LY7 (Cell line)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 8902.00 80.96 90.36 100.0 SNORD100-201 snoRNA OCI-LY7 (Cell line)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 237.00 2.16 2.41 100.0 SNORD100-201 snoRNA OCI-LY7 (Cell line)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 200.00 28.29 2.03 100.0 SNORD111B-201 snoRNA OCI-LY7 (Cell line)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 2.00 0.23 0.02 100.0 RNU2-36P-201 snRNA OCI-LY7 (Cell line)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 80.00 9.28 0.81 100.0 RNU2-36P-201 snRNA OCI-LY7 (Cell line)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 308.00 0.27 3.13 100.0 SNORD19C-201 snoRNA OCI-LY7 (Cell line)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 107833.00 93.93 1094.61 96.89 SNORD19C-201 snoRNA OCI-LY7 (Cell line)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 2937.00 2.95 29.81 100.0 SNORD12B-201 snoRNA OCI-LY7 (Cell line)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 170.00 0.17 1.73 100.0 SNORD12B-201 snoRNA OCI-LY7 (Cell line)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 87802.00 88.07 891.28 95.17 SNORD12B-201 snoRNA OCI-LY7 (Cell line)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 45.00 11.51 0.46 100.0 Y_RNA.609-201 misc RNA OCI-LY7 (Cell line)