ENCFF521RDG
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | OCI-LY7 (Cell line) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR740DKM |
| Description: | Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning. |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000387365.1 | ENST00000387365.1_1_51_+ | 1–51 | 1325.00 | 14.77 | 13.45 | 90.2 | MT-TI-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387365.1 | ENST00000387365.1_1_58_+ | 1–58 | 3539.00 | 39.45 | 35.92 | 100.0 | MT-TI-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387372.1 | ENST00000387372.1_1_30_+ | 1–30 | 2297.25 | 4.57 | 23.32 | 64.42 | MT-TQ-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387372.1 | ENST00000387372.1_1_32_+ | 1–32 | 2303.62 | 4.58 | 23.38 | 51.92 | MT-TQ-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387372.1 | ENST00000387372.1_1_55_+ | 1–55 | 7245.00 | 14.41 | 73.54 | 100.0 | MT-TQ-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387372.1 | ENST00000387372.1_1_36_+ | 1–36 | 1107.00 | 2.20 | 11.24 | 81.4 | MT-TQ-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387377.1 | ENST00000387377.1_1_51_+ | 1–51 | 549.00 | 1.93 | 5.57 | 100.0 | MT-TM-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387377.1 | ENST00000387377.1_1_31_+ | 1–31 | 19010.00 | 66.84 | 192.97 | 91.32 | MT-TM-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387405.1 | ENST00000387405.1_1_24_+ | 1–24 | 169.00 | 7.42 | 1.72 | 100.0 | MT-TC-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_65_+ | 1–65 | 2949.00 | 18.58 | 29.94 | 100.0 | MT-TY-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_50_+ | 1–50 | 13.00 | 0.08 | 0.13 | 100.0 | MT-TY-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_28_+ | 1–28 | 1770.00 | 11.15 | 17.97 | 100.0 | MT-TY-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_37_+ | 1–37 | 1336.00 | 8.42 | 13.56 | 65.85 | MT-TY-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_32_+ | 1–32 | 2340.00 | 14.75 | 23.75 | 70.82 | MT-TY-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_56_+ | 1–56 | 572.00 | 3.60 | 5.81 | 100.0 | MT-TY-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387419.1 | ENST00000387419.1_1_51_+ | 1–51 | 119.00 | 11.25 | 1.21 | 100.0 | MT-TD-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387421.1 | ENST00000387421.1_1_58_+ | 1–58 | 7698.00 | 34.79 | 78.14 | 100.0 | MT-TK-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387421.1 | ENST00000387421.1_1_52_+ | 1–52 | 8986.00 | 40.61 | 91.22 | 100.0 | MT-TK-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387421.1 | ENST00000387421.1_1_28_+ | 1–28 | 44.00 | 0.20 | 0.45 | 100.0 | MT-TK-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387449.1 | ENST00000387449.1_1_26_+ | 1–26 | 728.00 | 7.42 | 7.39 | 100.0 | MT-TS2-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387449.1 | ENST00000387449.1_1_53_+ | 1–53 | 332.00 | 3.39 | 3.37 | 100.0 | MT-TS2-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387449.1 | ENST00000387449.1_1_20_+ | 1–20 | 1017.00 | 10.37 | 10.32 | 90.0 | MT-TS2-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387456.1 | ENST00000387456.1_1_31_+ | 1–31 | 1022.00 | 10.44 | 10.37 | 100.0 | MT-TL2-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387459.1 | ENST00000387459.1_40_67_+ | 40–67 | 2759.00 | 1.60 | 28.01 | 73.75 | MT-TE-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387459.1 | ENST00000387459.1_39_69_+ | 39–69 | 982.00 | 0.57 | 9.97 | 58.42 | MT-TE-201 | Mt tRNA | OCI-LY7 (Cell line) |