ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 2.00 50.00 0.02 100.0 MIR660-201 miRNA OCI-LY7 (Cell line)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 59.28 11.81 0.60 17.38 MIR182-201 miRNA OCI-LY7 (Cell line)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 296.20 59.00 3.01 62.89 MIR182-201 miRNA OCI-LY7 (Cell line)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 2.00 100.00 0.02 100.0 MIR100-201 miRNA OCI-LY7 (Cell line)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 23.00 100.00 0.23 100.0 MIR301A-201 miRNA OCI-LY7 (Cell line)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 1.00 100.00 0.01 100.0 MIR130A-201 miRNA OCI-LY7 (Cell line)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 2301.00 98.25 23.36 99.22 MIRLET7F2-201 miRNA OCI-LY7 (Cell line)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 1.00 33.33 0.01 100.0 MIR652-201 miRNA OCI-LY7 (Cell line)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 95.00 13.61 0.96 100.0 MIR140-201 miRNA OCI-LY7 (Cell line)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 3.00 1.81 0.03 100.0 MIR106B-201 miRNA OCI-LY7 (Cell line)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 53.00 31.93 0.54 41.73 MIR106B-201 miRNA OCI-LY7 (Cell line)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 11288.00 18.23 114.58 94.62 SNORD83A-201 snoRNA OCI-LY7 (Cell line)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 46361.00 74.88 470.61 98.15 SNORD83A-201 snoRNA OCI-LY7 (Cell line)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 126.00 60.87 1.28 100.0 SNORD41-201 snoRNA OCI-LY7 (Cell line)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 88.00 1.24 0.89 100.0 MT-TF-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 143.00 2.01 1.45 53.96 MT-TF-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 50.00 0.70 0.51 11.19 MT-TF-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 392.00 4.91 3.98 100.0 MT-TV-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 33.00 0.07 0.33 84.62 MT-RNR2-201 Mt rRNA OCI-LY7 (Cell line)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 5.00 0.01 0.05 100.0 MT-RNR2-201 Mt rRNA OCI-LY7 (Cell line)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 7.00 0.01 0.07 100.0 MT-RNR2-201 Mt rRNA OCI-LY7 (Cell line)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 5.00 0.01 0.05 100.0 MT-RNR2-201 Mt rRNA OCI-LY7 (Cell line)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 32.00 0.07 0.32 88.89 MT-RNR2-201 Mt rRNA OCI-LY7 (Cell line)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 9.00 0.02 0.09 100.0 MT-RNR2-201 Mt rRNA OCI-LY7 (Cell line)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 58.00 0.12 0.59 100.0 MT-RNR2-201 Mt rRNA OCI-LY7 (Cell line)