ENCFF518LYU

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_21_+ 6–21 2306.00 3.28 1.93 100.0 MIR30D-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 51542.00 73.21 43.18 94.45 MIR30D-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 13154.00 18.68 11.02 81.29 MIR30D-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 4250.00 76.40 3.56 100.0 MIR126-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 1080.00 19.41 0.90 92.39 MIR126-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 280.00 28.08 0.23 100.0 MIR374A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 1619.00 70.67 1.36 100.0 MIR31-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 98.00 0.01 0.08 100.0 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 2773.00 0.36 2.32 52.51 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 66.00 0.01 0.06 100.0 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 1230.44 0.16 1.03 36.14 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 537.00 0.07 0.45 74.69 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 96.00 0.01 0.08 70.59 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 680.12 0.09 0.57 28.61 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 2609.27 0.34 2.19 64.06 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 907.00 0.12 0.76 53.48 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 1282.00 0.17 1.07 64.1 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 2038.92 0.27 1.71 66.89 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 3554.00 0.47 2.98 62.44 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 52.00 0.01 0.04 100.0 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 5957.00 0.78 4.99 91.1 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 8764.00 1.15 7.34 95.9 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 122.00 0.02 0.10 81.33 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 1444.00 0.19 1.21 45.39 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 395106.00 51.87 331.00 99.91 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)