ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 35955.00 53.15 142.13 66.39 RNA5SP358-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 183.00 0.67 0.72 68.03 RNA5SP145-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 2.00 10.00 0.01 100.0 Y_RNA.105-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 12.00 2.50 0.05 100.0 RNY4P9-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 11.00 0.16 0.04 100.0 RNU5B-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 386.00 5.71 1.53 100.0 RNU5B-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 228.00 3.37 0.90 100.0 RNU5B-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 1122.00 90.19 4.44 96.06 SNORD115-18-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 23.00 1.82 0.09 58.97 RNY4P27-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 72.00 5.69 0.28 81.82 RNY4P27-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 343.00 12.60 1.36 100.0 Y_RNA.136-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 24.00 47.06 0.09 100.0 SNORD115-41-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 1.00 5.56 0.00 100.0 SNORD115-33-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 1111.00 86.19 4.39 95.69 SNORD114-25-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 1480.00 92.62 5.85 100.0 SNORD113-7-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 122.00 29.47 0.48 100.0 Y_RNA.181-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 12.00 29.27 0.05 100.0 SNORD115-16-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 7.00 24.14 0.03 100.0 SNORD115-32-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 5.00 41.67 0.02 100.0 SNORD115-30-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 6.00 0.09 0.02 100.0 RNY1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 1536.00 23.87 6.07 100.0 RNY1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 1132.08 17.60 4.48 54.14 RNY1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 123.65 1.92 0.49 12.43 RNY1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 41.00 0.64 0.16 100.0 RNY1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 22.00 34.92 0.09 100.0 SNORD115-42-201 snoRNA esophagus squamous epithelium (Tissue)