ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 5.00 0.34 0.02 100.0 RNU5E-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 257.00 0.88 1.02 40.92 RNA5SP370-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 29.00 2.40 0.11 100.0 SNORA31-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 1066.00 3.64 4.21 100.0 RNA5SP389-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 93.00 0.32 0.37 100.0 RNA5SP389-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 314.00 1.07 1.24 46.87 RNA5SP389-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 376.00 1.28 1.49 65.39 RNA5SP389-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 1231.00 3.56 4.87 70.5 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 3764.00 10.89 14.88 79.98 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 220.39 0.64 0.87 57.1 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 3549.00 10.26 14.03 81.83 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 727.00 2.10 2.87 70.31 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 305.00 0.88 1.21 100.0 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 7925.00 22.92 31.33 92.96 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 1056.00 3.05 4.17 41.95 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 971.33 2.81 3.84 65.63 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 864.00 2.50 3.42 70.13 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 196.42 0.57 0.78 66.58 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 671.00 1.94 2.65 100.0 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 701.43 2.03 2.77 39.43 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 1057.00 3.06 4.18 26.23 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 187.00 93.03 0.74 100.0 SNORD114-14-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 256.00 1.17 1.01 100.0 SNORD104-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 1305.00 5.97 5.16 100.0 SNORD104-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 79.00 56.83 0.31 80.61 SNORD115-9-201 snoRNA esophagus squamous epithelium (Tissue)