ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 9.00 9.78 0.04 100.0 SNHG14-306 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 1.00 1.09 0.00 100.0 SNHG14-306 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 39.00 42.39 0.15 100.0 SNHG14-306 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 30.00 1.08 0.12 100.0 ENST00000666735 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 113.00 61.75 0.45 100.0 MEG8-242 lncRNA esophagus squamous epithelium (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 88.86 19.92 0.35 28.66 SNHG14-312 lncRNA esophagus squamous epithelium (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 254.57 57.08 1.01 82.12 SNHG14-312 lncRNA esophagus squamous epithelium (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 25.00 0.14 0.10 100.0 MEG8-244 lncRNA esophagus squamous epithelium (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 100.00 0.56 0.40 100.0 MEG8-244 lncRNA esophagus squamous epithelium (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 17501.00 97.38 69.18 99.18 MEG8-244 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 723.00 0.05 2.86 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 12.00 0.00 0.05 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 27456.00 2.09 108.53 99.49 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 526.14 0.04 2.08 63.31 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 2123.00 0.16 8.39 71.48 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 518542.00 39.38 2049.78 99.6 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 330.00 0.03 1.30 62.5 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 47639.00 3.62 188.32 99.44 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 3113.00 0.24 12.31 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 371293.00 28.20 1467.71 99.88 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 325.00 0.02 1.28 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 176.00 0.01 0.70 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 561.00 0.04 2.22 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 343.00 0.03 1.36 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 458.00 0.03 1.81 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)