ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 1364.00 54.32 5.39 93.62 SNHG14-241 lncRNA esophagus squamous epithelium (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 1616.00 95.17 6.39 100.0 MEG8-228 lncRNA esophagus squamous epithelium (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 144.00 28.24 0.57 100.0 SNHG14-254 lncRNA esophagus squamous epithelium (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 138.00 11.66 0.55 100.0 SNHG14-261 lncRNA esophagus squamous epithelium (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 510.00 43.07 2.02 77.51 SNHG14-261 lncRNA esophagus squamous epithelium (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 126.00 0.85 0.50 100.0 LIMD1-AS1-204 lncRNA esophagus squamous epithelium (Tissue)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 2001.00 13.53 7.91 100.0 LIMD1-AS1-204 lncRNA esophagus squamous epithelium (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 1634.00 11.05 6.46 94.51 LIMD1-AS1-204 lncRNA esophagus squamous epithelium (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 3655.00 55.79 14.45 80.45 MIR99AHG-262 lncRNA esophagus squamous epithelium (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1109.00 16.93 4.38 100.0 MIR99AHG-262 lncRNA esophagus squamous epithelium (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 24.00 48.98 0.09 100.0 SNHG14-270 lncRNA esophagus squamous epithelium (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 24.00 0.77 0.09 100.0 SNHG14-275 lncRNA esophagus squamous epithelium (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 30.00 62.50 0.12 93.75 MIR9-2HG-225 lncRNA esophagus squamous epithelium (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 65.00 29.68 0.26 100.0 MEG8-233 lncRNA esophagus squamous epithelium (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 38.00 17.35 0.15 100.0 MEG8-233 lncRNA esophagus squamous epithelium (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 129.00 4.60 0.51 100.0 SNHG14-278 lncRNA esophagus squamous epithelium (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 2196.00 78.32 8.68 93.57 SNHG14-278 lncRNA esophagus squamous epithelium (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 109.00 34.94 0.43 100.0 MEG8-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 27.00 8.65 0.11 100.0 MEG8-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 2763.00 92.47 10.92 100.0 SNHG17-252 lncRNA esophagus squamous epithelium (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 245.00 7.43 0.97 70.4 SNHG14-288 lncRNA esophagus squamous epithelium (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 2886.00 87.53 11.41 98.13 SNHG14-288 lncRNA esophagus squamous epithelium (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 2.00 3.51 0.01 100.0 SNHG14-295 lncRNA esophagus squamous epithelium (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 151.00 60.89 0.60 100.0 MEG8-240 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 241.00 36.57 0.95 100.0 SNHG14-303 lncRNA esophagus squamous epithelium (Tissue)