ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 119.00 0.35 0.47 100.0 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 38.00 0.11 0.15 100.0 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 1429.00 4.21 5.65 23.33 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 374.00 1.10 1.48 100.0 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 15759.00 46.42 62.29 91.77 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 2866.00 1.07 11.33 100.0 MIRLET7A1HG-203 lncRNA esophagus squamous epithelium (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 454.00 89.72 1.79 100.0 MEG8-225 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 178366.00 90.84 705.07 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 620.00 0.32 2.45 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 28.00 0.01 0.11 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 11443.00 5.83 45.23 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 2913.00 1.48 11.51 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 17.00 0.35 0.07 100.0 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 2218.00 45.31 8.77 93.74 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 11.00 0.22 0.04 100.0 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 232.00 4.74 0.92 100.0 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 729.00 14.89 2.88 100.0 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 529.00 10.81 2.09 93.79 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 4578.00 16.82 18.10 40.76 ENST00000655317 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 1252.00 4.60 4.95 100.0 ENST00000655317 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 11314.00 41.57 44.72 66.95 ENST00000655317 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 808.00 2.97 3.19 100.0 ENST00000655317 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 1551.00 1.21 6.13 66.42 LINC01962-202 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 114339.00 89.27 451.98 100.0 LINC01962-202 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 199.00 0.16 0.79 100.0 LINC01962-202 lncRNA esophagus squamous epithelium (Tissue)