ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 60985.00 64.56 241.07 98.84 SNORD83A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 4204.00 81.85 16.62 100.0 SNORD41-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 91.00 4.05 0.36 100.0 MT-TF-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 174.00 7.74 0.69 59.18 MT-TF-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 121.00 5.38 0.48 41.72 MT-TF-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 1179.00 29.04 4.66 100.0 MT-TV-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 70.00 0.20 0.28 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 4223.00 12.10 16.69 83.89 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 534.00 1.53 2.11 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 6988.00 20.02 27.62 90.39 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 4.00 0.01 0.02 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 291.00 0.83 1.15 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 27.00 0.08 0.11 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 636.00 25.51 2.51 96.07 MT-TI-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 443.00 17.77 1.75 100.0 MT-TI-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 2795.06 13.36 11.05 64.24 MT-TQ-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 4365.58 20.87 17.26 62.9 MT-TQ-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 27.00 0.13 0.11 100.0 MT-TQ-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 7791.00 37.24 30.80 93.97 MT-TQ-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 1879.00 28.42 7.43 100.0 MT-TM-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 2362.00 35.73 9.34 92.23 MT-TM-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 724.00 21.89 2.86 100.0 MT-TC-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 10389.00 28.79 41.07 91.92 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 94.00 0.26 0.37 100.0 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 8783.00 24.34 34.72 100.0 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)