ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 536.00 0.28 2.12 100.0 MIR27B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 15.00 88.24 0.06 100.0 MIR196A2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 94.00 93.07 0.37 100.0 MIR577-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 108.00 82.44 0.43 86.4 MIR654-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 58.00 90.62 0.23 98.31 MIR204-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 912.00 94.02 3.61 100.0 MIR152-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 1306.00 89.76 5.16 100.0 MIR30C1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 105.00 81.40 0.42 100.0 MIR660-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 239.00 4.34 0.94 100.0 MIR125B1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 3644.00 66.12 14.40 80.41 MIR125B1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 24.00 48.00 0.09 100.0 MIR493-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 20.00 40.00 0.08 100.0 MIR493-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 13303.68 11.62 52.59 18.9 MIR182-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 70784.70 61.82 279.81 65.7 MIR182-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 9425.00 90.87 37.26 92.77 MIR100-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 124.00 93.94 0.49 100.0 MIR301A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 500.00 24.53 1.98 63.61 MIR130A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 1524.00 74.78 6.02 88.81 MIR130A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 132320.00 98.53 523.06 99.09 MIRLET7F2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 97.00 76.98 0.38 100.0 MIR652-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 4.00 66.67 0.02 100.0 MIR653-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 1055.00 74.40 4.17 100.0 MIR140-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 25.00 14.37 0.10 100.0 MIR106B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 39.00 22.41 0.15 60.94 MIR106B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 28105.00 29.75 111.10 96.7 SNORD83A-201 snoRNA esophagus squamous epithelium (Tissue)