ENCFF503PBD

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 45.00 0.09 0.43 95.74 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 1.00 0.02 0.01 100.0 SNHG14-323 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 1.00 0.64 0.01 100.0 MEG8-251 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 2.00 1.27 0.02 66.67 MEG8-251 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 12.00 0.63 0.11 100.0 SNHG14-336 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 7.00 0.37 0.07 38.89 SNHG14-336 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 6.00 0.09 0.06 100.0 SNHG14-341 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 2940.00 69.70 27.88 100.0 FMN2-209 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 1.00 0.00 0.01 100.0 LINC02739-203 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 376.00 0.52 3.56 13.72 LINC02739-203 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 14499.00 20.02 137.47 100.0 LINC02739-203 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 880.00 1.21 8.34 100.0 LINC02739-203 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 11620.00 16.04 110.17 100.0 LINC02739-203 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 2364.00 3.26 22.41 86.28 LINC02739-203 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 203.00 62.85 1.92 100.0 MIR124-1HG-216 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 175.00 19.19 1.66 100.0 SNHG10-212 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 265.33 3.84 2.52 96.84 SNHG19-202 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 8.84 0.13 0.08 6.45 SNHG19-202 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 76598.00 68.69 726.25 100.0 MIR222HG-206 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 24380.00 21.86 231.16 92.46 MIR222HG-206 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 1752.00 1.57 16.61 100.0 MIR222HG-206 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_190_212_+ 190–212 113827.07 6.68 1079.24 82.32 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_485_+ 458–485 40062.00 2.35 379.84 100.0 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_313_335_+ 313–335 41084.00 2.41 389.53 40.77 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_313_333_+ 313–333 59674.00 3.50 565.79 74.46 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)