ENCFF503PBD

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000688371.3 ENST00000688371.3_190_210_+ 190–210 26340.94 1.55 249.75 26.19 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 430423.00 25.25 4081.00 100.0 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 488682.00 28.67 4633.38 96.24 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 159985.00 9.39 1516.88 86.14 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_490_+ 458–490 42182.00 2.47 399.94 100.0 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_481_+ 458–481 75274.00 4.42 713.70 50.11 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 81.00 12.04 0.77 100.0 RPSA-216 retained intron mesendoderm (In vitro differentiated cells)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 3.00 60.00 0.03 100.0 MIR99AHG-370 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 2.00 40.00 0.02 100.0 MIR99AHG-370 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 24111.00 98.82 228.61 100.0 HPS4-237 retained intron mesendoderm (In vitro differentiated cells)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 132.00 76.30 1.25 100.0 MEG8-253 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 37.00 29.13 0.35 100.0 MEG9-206 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 9.00 7.09 0.09 100.0 MEG9-206 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 15.00 11.81 0.14 100.0 MEG9-206 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 4124.00 12.43 39.10 100.0 DNAJC5-203 nonsense mediated decay mesendoderm (In vitro differentiated cells)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 852.00 5.61 8.08 100.0 ENST00000707189 TEC mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 2.00 0.00 0.02 100.0 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 1233222.56 66.00 11692.65 71.7 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 4474.00 0.24 42.42 100.0 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 6775.00 0.36 64.24 100.0 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 539149.34 28.86 5111.88 31.37 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 24717.00 1.32 234.35 100.0 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 1013.00 0.05 9.60 100.0 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 11288.00 0.60 107.03 100.0 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 21375.00 1.14 202.66 100.0 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)