ENCFF503PBD

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 802.00 0.58 7.60 100.0 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 3113.00 2.25 29.52 98.33 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 919.00 0.66 8.71 100.0 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 6.00 0.00 0.06 85.71 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 3225.00 2.33 30.58 100.0 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 926.00 0.67 8.78 100.0 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 140.00 0.10 1.33 100.0 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 1413.00 1.02 13.40 93.76 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 7.73 0.01 0.07 77.33 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 334.00 0.24 3.17 100.0 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 1257.00 0.91 11.92 64.0 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1.00 0.00 0.01 100.0 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 198.00 0.14 1.88 100.0 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 6.00 0.00 0.06 100.0 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 33.00 0.38 0.31 100.0 SNHG14-315 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 17.00 0.20 0.16 94.44 SNHG14-315 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 21.00 0.24 0.20 84.0 SNHG14-315 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 2916.00 5.64 27.65 100.0 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 120.36 0.23 1.14 23.37 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 4.00 0.01 0.04 100.0 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 264.00 0.51 2.50 100.0 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 519.74 1.00 4.93 82.24 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 9.00 0.02 0.09 52.94 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 157.00 0.30 1.49 100.0 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 38314.00 74.05 363.27 100.0 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)