ENCFF503PBD

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 31107.00 72.13 294.94 87.96 FTX-219 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 367.00 1.03 3.48 38.75 CTC1-214 protein coding mesendoderm (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 2.00 0.01 0.02 28.57 CTC1-214 protein coding mesendoderm (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 2640.00 7.43 25.03 48.51 CTC1-214 protein coding mesendoderm (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 5.00 0.01 0.05 71.43 CTC1-214 protein coding mesendoderm (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 8330.00 23.43 78.98 90.45 CTC1-214 protein coding mesendoderm (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 13.00 0.04 0.12 100.0 CTC1-214 protein coding mesendoderm (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 674.00 1.90 6.39 100.0 CTC1-214 protein coding mesendoderm (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 2845.00 8.00 26.97 100.0 CTC1-214 protein coding mesendoderm (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 113.00 2.06 1.07 66.86 ENST00000651540 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 76.00 1.39 0.72 100.0 ENST00000651540 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 2.00 0.04 0.02 100.0 ENST00000651540 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 230.00 4.20 2.18 70.99 ENST00000651540 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 73.00 1.33 0.69 100.0 ENST00000651540 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 1.00 0.02 0.01 100.0 ENST00000651540 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 2.00 0.04 0.02 100.0 ENST00000651540 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 2050.00 37.45 19.44 72.75 ENST00000651540 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 17.00 0.31 0.16 100.0 ENST00000651540 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 1688.00 30.84 16.00 53.02 ENST00000651540 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 29.00 1.17 0.27 100.0 MIRLET7A1HG-203 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 2007.00 15.66 19.03 100.0 SNHG29-232 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 2.00 0.02 0.02 100.0 SNHG29-232 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 363.00 2.83 3.44 100.0 SNHG29-232 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 1630.00 12.72 15.45 100.0 SNHG29-232 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 88.00 0.69 0.83 100.0 SNHG29-232 lncRNA mesendoderm (In vitro differentiated cells)