ENCFF503PBD

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 35.00 0.01 0.33 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 212.00 0.04 2.01 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 3716.00 0.74 35.23 99.33 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 13142.00 2.60 124.60 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 234.00 0.05 2.22 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 1362.00 0.27 12.91 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 34852.00 6.90 330.44 99.59 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 5251.00 1.04 49.79 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 76521.00 15.15 725.52 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 55099.00 10.91 522.41 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 8727.00 1.73 82.74 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 192821.00 38.17 1828.21 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 3478.00 0.69 32.98 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 221.00 0.04 2.10 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 1868.00 0.37 17.71 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 5005.00 0.99 47.45 68.23 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 25485.00 5.04 241.63 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 8.00 0.00 0.08 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 7.00 0.00 0.07 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 258.00 0.05 2.45 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 3002.00 0.59 28.46 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 868.00 0.17 8.23 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 152.00 0.03 1.44 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 3.00 0.00 0.03 100.0 GAS5-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 792.00 1.84 7.51 100.0 FTX-219 lncRNA mesendoderm (In vitro differentiated cells)