ENCFF503PBD

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 6.00 1.84 0.06 75.0 ENST00000619323 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 236.00 72.39 2.24 99.16 ENST00000619323 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 246.00 24.00 2.33 100.0 SCARNA4-202 scaRNA mesendoderm (In vitro differentiated cells)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 1.00 0.05 0.01 100.0 ENST00000628177 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 17967.00 85.33 170.35 100.0 ENST00000630615 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 81.00 26.91 0.77 100.0 DMRT2-209 protein coding mesendoderm (In vitro differentiated cells)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 96.00 31.89 0.91 100.0 DMRT2-209 protein coding mesendoderm (In vitro differentiated cells)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 550.00 76.07 5.21 100.0 SNORD98-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 7.00 0.97 0.07 100.0 SNORD98-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 462308.96 25.99 4383.33 28.56 MIR106AHG-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 23618.62 1.33 223.94 66.96 MIR106AHG-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 5915.00 0.33 56.08 100.0 MIR106AHG-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 13366.94 0.75 126.74 37.9 MIR106AHG-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 5.00 29.41 0.05 100.0 MEG8-222 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 4.00 0.02 0.04 80.0 SNHG14-224 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 9.00 0.05 0.09 81.82 SNHG14-224 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 5.00 0.03 0.05 100.0 SNHG14-224 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 1533.00 8.52 14.53 100.0 SNHG14-224 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 1.00 0.01 0.01 25.0 SNHG14-224 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 259.00 1.44 2.46 83.28 SNHG14-224 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 172.00 0.96 1.63 49.71 SNHG14-224 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 5605.25 28.68 53.15 74.2 5S_rRNA.20-201 rRNA pseudogene mesendoderm (In vitro differentiated cells)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 5.00 0.39 0.05 100.0 HSPA9-211 retained intron mesendoderm (In vitro differentiated cells)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 45.00 3.51 0.43 88.24 HSPA9-211 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 464.00 97.07 4.40 100.0 DNM3OS-205 lncRNA mesendoderm (In vitro differentiated cells)