ENCFF503PBD

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 8145.00 93.79 77.23 100.0 MIR744-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 286.00 77.93 2.71 100.0 MIR378C-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 17.00 8.37 0.16 14.41 MIR142HG-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 18.00 8.87 0.17 100.0 MIR142HG-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 17.00 8.37 0.16 12.14 MIR142HG-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 1.50 0.02 0.01 49.95 RPL23A-208 retained intron mesendoderm (In vitro differentiated cells)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 2.49 0.03 0.02 83.14 RPL23A-208 retained intron mesendoderm (In vitro differentiated cells)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 3336.00 42.61 31.63 68.71 RPL23A-208 retained intron mesendoderm (In vitro differentiated cells)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 3323.00 42.44 31.51 87.96 RPL23A-208 retained intron mesendoderm (In vitro differentiated cells)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 1.00 0.32 0.01 100.0 MIR133A1HG-202 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 10.00 0.13 0.09 4.59 RPL17-211 retained intron mesendoderm (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 12.00 0.15 0.11 20.0 RPL17-211 retained intron mesendoderm (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 8.00 0.10 0.08 100.0 RPL17-211 retained intron mesendoderm (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 2347.00 29.59 22.25 99.7 RPL17-211 retained intron mesendoderm (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 497.00 6.26 4.71 98.61 RPL17-211 retained intron mesendoderm (In vitro differentiated cells)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 24.00 19.67 0.23 96.0 ENST00000582320 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 84.00 68.85 0.80 100.0 ENST00000582320 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 5.00 4.10 0.05 100.0 ENST00000582320 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 427.00 10.64 4.05 100.0 RPL17-214 retained intron mesendoderm (In vitro differentiated cells)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 383.38 9.56 3.63 32.71 RPL17-214 retained intron mesendoderm (In vitro differentiated cells)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 942.11 23.48 8.93 68.87 RPL17-214 retained intron mesendoderm (In vitro differentiated cells)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 1768.00 2.10 16.76 100.0 SNORD43-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000583861.1 ENST00000583861.1_27_62_+ 27–62 6326.00 7.53 59.98 100.0 SNORD43-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 64337.00 76.55 610.00 99.84 SNORD43-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 1477.00 92.31 14.00 100.0 MIR151B-201 miRNA mesendoderm (In vitro differentiated cells)