ENCFF503PBD

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 2352.00 19.60 22.30 98.91 RPL21-209 retained intron mesendoderm (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 1981.00 16.51 18.78 100.0 RPL21-209 retained intron mesendoderm (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 2026.00 16.89 19.21 100.0 RPL21-209 retained intron mesendoderm (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 325.00 2.71 3.08 100.0 RPL21-209 retained intron mesendoderm (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 578.00 4.82 5.48 99.66 RPL21-209 retained intron mesendoderm (In vitro differentiated cells)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 1007.00 32.14 9.55 100.0 GABRE-209 retained intron mesendoderm (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 7.00 0.05 0.07 100.0 RPL13A-212 retained intron mesendoderm (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_804_886_+ 804–886 25.00 0.19 0.24 86.21 RPL13A-212 retained intron mesendoderm (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 389.00 3.00 3.69 100.0 RPL13A-212 retained intron mesendoderm (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_1363_1444_+ 1363–1444 9.00 0.07 0.09 100.0 RPL13A-212 retained intron mesendoderm (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 3.00 0.02 0.03 100.0 RPL13A-212 retained intron mesendoderm (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 308.00 2.38 2.92 98.72 RPL13A-212 retained intron mesendoderm (In vitro differentiated cells)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 79.00 1.48 0.75 100.0 RPL7A-207 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000489392.1 ENST00000489392.1_116_191_+ 116–191 76.00 1.42 0.72 93.83 RPL7A-207 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 1959.00 36.59 18.57 100.0 RPL7A-207 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000490232.3 ENST00000490232.3_229_300_+ 229–300 1.00 0.04 0.01 20.0 RN7SL2-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 678.00 42.43 6.43 99.71 NOP56-217 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000494697.5 ENST00000494697.5_274_348_+ 274–348 18.00 1.13 0.17 94.74 NOP56-217 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 16.00 0.13 0.15 12.03 RABGGTB-213 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 3444.00 28.95 32.65 100.0 RABGGTB-213 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 69.00 0.58 0.65 100.0 RABGGTB-213 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 117.00 0.98 1.11 87.97 RABGGTB-213 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_471_552_+ 471–552 287.00 2.41 2.72 99.31 RABGGTB-213 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 1.00 0.01 0.01 100.0 RABGGTB-213 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 431.00 3.62 4.09 100.0 RABGGTB-213 protein coding CDS not defined mesendoderm (In vitro differentiated cells)