ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 196.00 1.77 0.39 100.0 SNORD66-201 snoRNA Peyer's patch (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 1882.00 64.92 3.75 100.0 SNORD17-201 snoRNA Peyer's patch (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 39.00 40.62 0.08 100.0 SNORD72-201 snoRNA Peyer's patch (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 1788.00 64.64 3.56 100.0 SNORD70B-201 snoRNA Peyer's patch (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 837.00 46.63 1.67 91.48 RNY4P18-201 misc RNA Peyer's patch (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 26435.00 62.31 52.64 100.0 SNORD69-201 snoRNA Peyer's patch (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 6694.00 15.78 13.33 100.0 SNORD69-201 snoRNA Peyer's patch (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 4893.00 11.53 9.74 100.0 SNORD69-201 snoRNA Peyer's patch (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 373.00 0.88 0.74 100.0 SNORD69-201 snoRNA Peyer's patch (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 15685.00 78.53 31.23 90.48 B4GALNT2-202 protein coding Peyer's patch (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 48.00 0.24 0.10 100.0 B4GALNT2-202 protein coding Peyer's patch (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 309.00 90.88 0.62 100.0 NDE1-202 protein coding Peyer's patch (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 8.00 22.86 0.02 100.0 MIR887-201 miRNA Peyer's patch (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 8.00 100.00 0.02 100.0 MIR889-201 miRNA Peyer's patch (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 10.00 76.92 0.02 100.0 MIR548K-201 miRNA Peyer's patch (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 170.00 63.91 0.34 100.0 MIR320B2-201 miRNA Peyer's patch (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 11.00 100.00 0.02 100.0 MIR1271-201 miRNA Peyer's patch (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 9678.00 61.57 19.27 100.0 SNORD100-201 snoRNA Peyer's patch (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 209.00 1.33 0.42 100.0 SNORD100-201 snoRNA Peyer's patch (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 3103.00 19.74 6.18 100.0 SNORD100-201 snoRNA Peyer's patch (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 871.00 5.54 1.73 100.0 SNORD100-201 snoRNA Peyer's patch (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 1874.00 70.53 3.73 100.0 SNORD111B-201 snoRNA Peyer's patch (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 280.00 1.52 0.56 100.0 RNU2-36P-201 snRNA Peyer's patch (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 1054.00 5.72 2.10 100.0 RNU2-36P-201 snRNA Peyer's patch (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 48366.00 96.23 96.30 99.35 SNORD19C-201 snoRNA Peyer's patch (Tissue)