ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 251.00 49.60 0.50 100.0 MT-TD-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 53358.00 84.14 106.24 100.0 MT-TK-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 83.00 0.13 0.17 100.0 MT-TK-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 343.00 0.54 0.68 100.0 MT-TK-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 6377.00 10.06 12.70 100.0 MT-TK-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 223.00 4.09 0.44 100.0 MT-TS2-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 26.00 0.48 0.05 100.0 MT-TS2-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 338.00 6.20 0.67 90.62 MT-TS2-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 38.00 7.21 0.08 100.0 MT-TL2-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 1945.00 2.05 3.87 95.95 MT-TE-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 351.00 0.37 0.70 100.0 MT-TE-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 82.00 0.09 0.16 4.39 MT-TE-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 76245.00 80.40 151.81 90.73 MT-TE-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 753.00 0.79 1.50 100.0 MT-TE-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 672.00 0.71 1.34 84.0 MT-TE-201 Mt tRNA Peyer's patch (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 354.00 39.69 0.70 100.0 MIR196A1-201 miRNA Peyer's patch (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 104.00 3.22 0.21 100.0 MT-RNR1-201 Mt rRNA Peyer's patch (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 43.00 61.43 0.09 100.0 MIR454-201 miRNA Peyer's patch (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 466.00 85.50 0.93 100.0 MIR501-201 miRNA Peyer's patch (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 331.00 89.22 0.66 100.0 MIR769-201 miRNA Peyer's patch (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 41.00 56.16 0.08 100.0 KRTAP19-1-201 protein coding Peyer's patch (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 38.00 82.61 0.08 100.0 MIR509-3-201 miRNA Peyer's patch (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 998.00 70.28 1.99 83.72 RNU1-82P-201 snRNA Peyer's patch (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 1113.00 10.06 2.22 100.0 SNORD66-201 snoRNA Peyer's patch (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 3381.00 30.57 6.73 67.69 SNORD66-201 snoRNA Peyer's patch (Tissue)