ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1879.00 12.76 11.77 67.25 RNU5A-1-201 snRNA testis (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 431.75 2.93 2.71 64.06 RNU5A-1-201 snRNA testis (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 2926.00 19.88 18.33 68.98 RNU5A-1-201 snRNA testis (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 10662.00 93.64 66.81 100.0 SNORD114-14-201 snoRNA testis (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 130.00 0.43 0.81 100.0 SNORD104-201 snoRNA testis (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1061.00 3.52 6.65 100.0 SNORD104-201 snoRNA testis (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 6627.00 44.82 41.52 51.74 RNA5SP358-201 rRNA pseudogene testis (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 4.00 0.28 0.03 100.0 RNA5SP145-201 rRNA pseudogene testis (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 681.00 11.55 4.27 100.0 RNU5B-1-201 snRNA testis (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 1901.00 32.24 11.91 100.0 RNU5B-1-201 snRNA testis (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 33.00 0.56 0.21 100.0 RNU5B-1-201 snRNA testis (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 5.00 4.50 0.03 100.0 RNY4P27-201 misc RNA testis (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 60.00 14.39 0.38 100.0 Y_RNA.136-201 misc RNA testis (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 19250.00 95.33 120.62 99.28 SNORD114-25-201 snoRNA testis (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 9042.00 95.03 56.66 100.0 SNORD113-7-201 snoRNA testis (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 31.00 44.29 0.19 100.0 Y_RNA.181-201 misc RNA testis (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 20.00 3.15 0.13 100.0 RNY1-201 misc RNA testis (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 68.00 10.71 0.43 100.0 RNY1-201 misc RNA testis (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 133.79 21.07 0.84 73.92 RNY1-201 misc RNA testis (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 29.65 4.67 0.19 23.53 RNY1-201 misc RNA testis (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 1277.77 5.31 8.01 54.23 RNA5SP202-201 rRNA pseudogene testis (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 216.00 0.90 1.35 100.0 RNA5SP202-201 rRNA pseudogene testis (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 224.00 0.93 1.40 100.0 RNA5SP202-201 rRNA pseudogene testis (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 954.00 3.96 5.98 100.0 RNA5SP202-201 rRNA pseudogene testis (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 747.67 3.10 4.68 35.3 RNA5SP202-201 rRNA pseudogene testis (Tissue)