ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 15.00 41.67 0.09 100.0 MIR374A-201 miRNA testis (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 23.00 52.27 0.14 100.0 MIR31-201 miRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 169.21 0.66 1.06 50.51 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 113.00 0.44 0.71 36.69 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 236.80 0.92 1.48 51.37 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 890.00 3.47 5.58 69.05 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 44.00 0.17 0.28 100.0 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 5.00 0.02 0.03 100.0 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 262.00 1.02 1.64 77.51 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 43.00 0.17 0.27 100.0 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 167.00 0.65 1.05 98.82 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 79.00 0.31 0.50 68.7 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 5.00 0.02 0.03 100.0 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 659.00 2.57 4.13 77.17 RNA5S12-201 rRNA testis (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 14.00 17.07 0.09 100.0 Y_RNA.14-201 misc RNA testis (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 10.00 0.73 0.06 100.0 RNU5E-1-201 snRNA testis (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 161.00 9.38 1.01 100.0 SNORA31-201 snoRNA testis (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 70.00 4.79 0.44 100.0 RNA5SP389-201 rRNA pseudogene testis (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 89.00 6.09 0.56 76.72 RNA5SP389-201 rRNA pseudogene testis (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 20.00 1.37 0.13 20.83 RNA5SP389-201 rRNA pseudogene testis (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 1424.00 9.67 8.92 70.25 RNU5A-1-201 snRNA testis (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 1525.00 10.36 9.56 61.87 RNU5A-1-201 snRNA testis (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1879.00 12.76 11.77 67.25 RNU5A-1-201 snRNA testis (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 431.75 2.93 2.71 64.06 RNU5A-1-201 snRNA testis (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 2397.00 16.28 15.02 66.97 RNU5A-1-201 snRNA testis (Tissue)