ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 4.00 100.00 0.03 100.0 MIR543-201 miRNA testis (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 522.00 53.65 3.27 80.43 RNU1-82P-201 snRNA testis (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 1694.00 26.18 10.61 66.77 SNORD66-201 snoRNA testis (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 197.00 3.04 1.23 100.0 SNORD66-201 snoRNA testis (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 1011.00 15.62 6.33 100.0 SNORD66-201 snoRNA testis (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 16.00 47.06 0.10 100.0 U3.17-201 snoRNA testis (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 870.00 65.81 5.45 100.0 SNORD17-201 snoRNA testis (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 264.00 67.35 1.65 100.0 SNORD72-201 snoRNA testis (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 1220.00 61.93 7.64 100.0 SNORD70B-201 snoRNA testis (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 362.00 68.30 2.27 95.26 RNY4P18-201 misc RNA testis (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 2860.00 7.63 17.92 100.0 SNORD69-201 snoRNA testis (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 5328.00 14.21 33.38 100.0 SNORD69-201 snoRNA testis (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 26068.00 69.51 163.34 100.0 SNORD69-201 snoRNA testis (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 438.00 1.17 2.74 100.0 SNORD69-201 snoRNA testis (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 16111.00 88.86 100.95 93.61 B4GALNT2-202 protein coding testis (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 31.00 0.17 0.19 100.0 B4GALNT2-202 protein coding testis (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 13.00 20.97 0.08 100.0 NDE1-202 protein coding testis (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 18.00 51.43 0.11 100.0 MIR450B-201 miRNA testis (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 8.00 34.78 0.05 100.0 MIR887-201 miRNA testis (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 22.00 100.00 0.14 100.0 MIR889-201 miRNA testis (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 2.00 66.67 0.01 100.0 MIR548K-201 miRNA testis (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 94.00 71.76 0.59 100.0 MIR320B2-201 miRNA testis (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 7.00 87.50 0.04 100.0 MIR1271-201 miRNA testis (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 988.00 2.61 6.19 100.0 SNORD100-201 snoRNA testis (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 597.00 1.57 3.74 100.0 SNORD100-201 snoRNA testis (Tissue)