ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 501.00 6.90 1.65 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 259.00 20.95 0.85 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 101.00 8.17 0.33 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 67.00 5.42 0.22 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 156.00 12.62 0.51 82.11 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 799.00 0.14 2.63 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 537.00 42.99 1.77 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 1.00 0.32 0.00 33.33 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 2.00 0.64 0.01 66.67 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 832.00 11.79 2.74 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 47.00 0.67 0.15 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 2266.00 86.72 7.47 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 1105.00 59.67 3.64 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 343.00 22.82 1.13 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 294.00 0.83 0.97 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 158.00 0.45 0.52 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 172.00 0.49 0.57 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 1293.00 3.67 4.26 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 365.00 1.04 1.20 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 170.00 0.48 0.56 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 13078.00 2.27 43.11 97.69 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 293.00 0.05 0.97 57.91 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 244.00 0.04 0.80 77.22 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 3430.00 23.57 11.31 78.42 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 195.00 78.31 0.64 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA esophagus squamous epithelium (Tissue)