ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 18.00 0.08 0.06 100.0 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 52.00 0.22 0.17 100.0 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 489.00 2.05 1.61 100.0 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 18.00 0.08 0.06 100.0 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 162.00 0.68 0.53 100.0 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 2467.00 10.36 8.13 57.13 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 34.00 0.14 0.11 100.0 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 3927.00 16.49 12.95 71.71 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 1910.00 1.13 6.30 100.0 MIRLET7A1HG-203 lncRNA esophagus squamous epithelium (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 307.00 94.17 1.01 100.0 MEG8-225 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 355911.00 87.02 1173.25 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 534.00 0.13 1.76 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 167.00 0.04 0.55 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 7.00 0.00 0.02 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 31481.00 7.70 103.78 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 15946.00 3.90 52.57 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_463_540_+ 463–540 1.00 0.00 0.00 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 12.00 0.31 0.04 100.0 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 1550.00 39.41 5.11 84.56 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 18.00 0.46 0.06 100.0 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 118.00 3.00 0.39 100.0 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 721.00 18.33 2.38 100.0 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 324.00 8.24 1.07 92.57 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 1772.00 14.34 5.84 39.07 ENST00000655317 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 194.00 1.57 0.64 100.0 ENST00000655317 lncRNA esophagus squamous epithelium (Tissue)