ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 1358.00 90.90 4.48 100.0 SCARNA5-201 scaRNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 92.00 0.07 0.30 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 182.00 0.15 0.60 72.8 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 729.00 0.59 2.40 71.33 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 10220.00 8.24 33.69 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 3786.00 3.05 12.48 26.3 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 123.00 0.10 0.41 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 282.00 0.23 0.93 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 119.00 0.10 0.39 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 30659.00 24.72 101.07 99.05 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 55492.00 44.74 182.93 99.81 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 169.00 0.14 0.56 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 360.00 0.29 1.19 68.05 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 3289.00 82.49 10.84 91.95 MIR3142HG-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 3236.00 88.44 10.67 100.0 SNHG6-204 retained intron esophagus squamous epithelium (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 20517.00 75.71 67.63 88.11 MIR151A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 3323.00 12.26 10.95 100.0 MIR151A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 2304.00 99.61 7.60 100.0 DENND3-221 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 178.00 1.29 0.59 100.0 WDR74-204 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 326.00 2.36 1.07 100.0 WDR74-204 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 345.00 2.50 1.14 76.33 WDR74-204 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 156.00 1.13 0.51 100.0 WDR74-204 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 221.00 1.60 0.73 56.09 WDR74-204 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 1255.00 9.08 4.14 69.64 WDR74-204 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 173.00 1.25 0.57 43.91 WDR74-204 protein coding esophagus squamous epithelium (Tissue)