ENCFF429ILE

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR379GPS
Description: Part of ENCODE experiment ENCSR379GPS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 1283.00 12.14 6.38 100.0 ENST00000753088 lncRNA esophagus squamous epithelium (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 143.00 1.35 0.71 100.0 ENST00000753088 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 1377.24 3.30 6.85 48.98 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 6712.00 16.09 33.37 100.0 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 4073.00 9.77 20.25 100.0 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 1408.00 3.38 7.00 100.0 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 1159.90 2.78 5.77 32.13 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 2581.39 6.19 12.84 65.67 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 1249.43 3.00 6.21 23.1 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 1375.92 3.30 6.84 57.55 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 2084.00 5.00 10.36 100.0 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 5906.46 14.16 29.37 80.2 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 5.00 0.87 0.02 100.0 ENST00000756452 lncRNA esophagus squamous epithelium (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 903.00 20.91 4.49 100.0 ENST00000760093 lncRNA esophagus squamous epithelium (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 229.00 5.30 1.14 100.0 ENST00000760093 lncRNA esophagus squamous epithelium (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 2715.00 85.62 13.50 94.17 SNHG14-356 lncRNA esophagus squamous epithelium (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 2914.00 11.97 14.49 68.13 LINC02806-241 lncRNA esophagus squamous epithelium (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 98.00 0.40 0.49 100.0 LINC02806-241 lncRNA esophagus squamous epithelium (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 9952.00 40.87 49.48 84.24 LINC02806-241 lncRNA esophagus squamous epithelium (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 4211.00 97.21 20.94 100.0 EHBP1-AS1-210 lncRNA esophagus squamous epithelium (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 2397.00 47.34 11.92 100.0 ENST00000770398 lncRNA esophagus squamous epithelium (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 1435.00 28.34 7.14 100.0 ENST00000770398 lncRNA esophagus squamous epithelium (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 121.00 2.39 0.60 100.0 ENST00000770398 lncRNA esophagus squamous epithelium (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 820.00 7.86 4.08 100.0 ENST00000771298 lncRNA esophagus squamous epithelium (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 103.00 0.99 0.51 100.0 ENST00000771298 lncRNA esophagus squamous epithelium (Tissue)