ENCFF429ILE

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR379GPS
Description: Part of ENCODE experiment ENCSR379GPS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 1698.00 0.78 8.44 80.17 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 1039.00 46.22 5.17 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 483.00 7.57 2.40 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 97273.00 92.30 483.66 99.66 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 4.00 0.03 0.02 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 5546.00 36.87 27.58 86.72 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 49.00 6.03 0.24 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 32.00 1.64 0.16 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 51.00 1.41 0.25 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 9933.00 85.81 49.39 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 625.00 91.24 3.11 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 8776.00 28.38 43.64 94.69 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 415.00 1.34 2.06 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 35.00 0.04 0.17 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 5721.00 64.48 28.45 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 132.00 1.88 0.66 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 38.00 1.28 0.19 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 428.00 14.46 2.13 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 374.00 12.64 1.86 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 22.00 15.17 0.11 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA esophagus squamous epithelium (Tissue)