ENCFF400GBK

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR587CPE
Description: Part of ENCODE experiment ENCSR587CPE. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 11.00 91.67 0.05 91.67 MIR149-201 miRNA spleen (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 399.00 86.93 1.97 99.5 MIR181C-201 miRNA spleen (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 22.00 4.79 0.11 100.0 MIR181C-201 miRNA spleen (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 23.00 62.16 0.11 100.0 MIR194-1-201 miRNA spleen (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 247.00 60.39 1.22 65.17 MIR128-2-201 miRNA spleen (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 20.00 60.61 0.10 74.07 MIR99A-201 miRNA spleen (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 308.00 0.47 1.52 83.24 MIR28-201 miRNA spleen (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 58818.00 90.44 290.17 93.23 MIR28-201 miRNA spleen (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 868.00 1.33 4.28 100.0 MIR28-201 miRNA spleen (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 141.00 66.51 0.70 100.0 MIR183-201 miRNA spleen (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 995.00 81.83 4.91 100.0 MIR145-201 miRNA spleen (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 61.00 5.02 0.30 100.0 MIR145-201 miRNA spleen (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 4536.00 95.23 22.38 96.94 MIR186-201 miRNA spleen (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 11.00 91.67 0.05 100.0 MIR200B-201 miRNA spleen (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 87.00 28.90 0.43 100.0 MIR218-1-201 miRNA spleen (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 12253.00 90.49 60.45 96.09 MIR181B2-201 miRNA spleen (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 2.00 28.57 0.01 100.0 MIR495-201 miRNA spleen (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 1490666.00 87.69 7353.93 88.57 MIR10B-201 miRNA spleen (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 150.71 54.21 0.74 64.68 MIR130B-201 miRNA spleen (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 37.00 13.31 0.18 100.0 MIR130B-201 miRNA spleen (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 43.62 15.69 0.22 34.34 MIR130B-201 miRNA spleen (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 2231.00 23.56 11.01 100.0 MIR199A1-201 miRNA spleen (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 35.00 72.92 0.17 100.0 MIR487B-201 miRNA spleen (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 1009.93 67.69 4.98 70.53 MIR93-201 miRNA spleen (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 377.88 25.33 1.86 34.07 MIR93-201 miRNA spleen (Tissue)