ENCFF400GBK

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR587CPE
Description: Part of ENCODE experiment ENCSR587CPE. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 479.00 0.91 2.36 100.0 SNORD38A-201 snoRNA spleen (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 3183.00 6.03 15.70 100.0 SNORD38A-201 snoRNA spleen (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 3533.00 85.44 17.43 97.57 SNORD114-20-201 snoRNA spleen (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 10.00 0.54 0.05 100.0 7SK.1-201 misc RNA spleen (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 51.00 2.73 0.25 100.0 7SK.1-201 misc RNA spleen (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 324.00 17.37 1.60 79.02 7SK.1-201 misc RNA spleen (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 316.00 16.94 1.56 77.45 7SK.1-201 misc RNA spleen (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 237.00 12.71 1.17 73.37 7SK.1-201 misc RNA spleen (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 548.00 60.15 2.70 100.0 RNA5SP77-201 rRNA pseudogene spleen (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 10155.00 69.97 50.10 100.0 SNORD114-22-201 snoRNA spleen (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 3936.00 27.12 19.42 96.97 SNORD114-22-201 snoRNA spleen (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 10420.00 82.09 51.41 100.0 SNORD6-201 snoRNA spleen (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 402.00 3.17 1.98 100.0 SNORD6-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 5621.06 17.86 27.73 59.06 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 952.00 3.03 4.70 100.0 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 1531.00 4.87 7.55 100.0 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 4922.00 15.64 24.28 91.86 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 4065.08 12.92 20.05 42.71 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 10629.00 33.78 52.44 98.53 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 255.00 0.81 1.26 100.0 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 42537.00 96.44 209.85 97.84 MIR146B-201 miRNA spleen (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 6214.00 84.98 30.66 100.0 SNHG20-201 lncRNA spleen (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 22.00 6.75 0.11 100.0 ATP5MK-205 protein coding spleen (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 71.00 21.78 0.35 100.0 ATP5MK-205 protein coding spleen (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 8.00 14.04 0.04 100.0 LINC01556-201 lncRNA spleen (Tissue)