ENCFF400GBK

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR587CPE
Description: Part of ENCODE experiment ENCSR587CPE. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 171.00 46.59 0.84 100.0 ATAD3A-202 protein coding spleen (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 69.00 12.99 0.34 30.53 TMC5-202 protein coding spleen (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 156.00 93.98 0.77 100.0 ZMYM2-203 protein coding spleen (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 151.00 4.09 0.74 100.0 RNVU1-7-201 snRNA spleen (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 358.00 89.05 1.77 100.0 Y_RNA.389-201 misc RNA spleen (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 326.00 0.20 1.61 100.0 SNORD101-201 snoRNA spleen (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 157190.00 96.77 775.47 99.94 SNORD101-201 snoRNA spleen (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 14.00 0.01 0.07 1.41 SNORD101-201 snoRNA spleen (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 1135.00 0.70 5.60 100.0 SNORD101-201 snoRNA spleen (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 37226.00 97.22 183.65 100.0 SNORD37-201 snoRNA spleen (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 24398.00 94.48 120.36 100.0 SNORD59A-201 snoRNA spleen (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 504.00 55.81 2.49 100.0 SNORA7B-201 snoRNA spleen (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 156.00 34.67 0.77 100.0 Y_RNA.555-201 misc RNA spleen (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 19158.00 91.86 94.51 93.4 MIR25-201 miRNA spleen (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 5739.00 90.76 28.31 96.66 MIR99B-201 miRNA spleen (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 1939.00 51.13 9.57 79.79 MIR23B-201 miRNA spleen (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 1500.00 39.56 7.40 86.11 MIR23B-201 miRNA spleen (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 10.00 6.67 0.05 100.0 MIR203A-201 miRNA spleen (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 63.00 0.88 0.31 100.0 MIR199B-201 miRNA spleen (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 6350.00 88.60 31.33 92.8 MIR199B-201 miRNA spleen (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 683.00 93.69 3.37 100.0 MIR30B-201 miRNA spleen (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 261.00 93.21 1.29 100.0 MIR181D-201 miRNA spleen (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 14.00 93.33 0.07 100.0 MIR215-201 miRNA spleen (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 664.00 0.43 3.28 100.0 MIR181A2-201 miRNA spleen (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 55132.00 98.01 271.98 99.24 MIR191-201 miRNA spleen (Tissue)