ENCFF400GBK

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR587CPE
Description: Part of ENCODE experiment ENCSR587CPE. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 464.95 8.97 2.29 36.81 RNY1-201 misc RNA spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 7710.85 5.44 38.04 35.22 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 424.00 0.30 2.09 100.0 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 2167.44 1.53 10.69 65.84 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 273.00 0.19 1.35 100.0 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 1537.28 1.09 7.58 44.43 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 833.00 0.59 4.11 100.0 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 436.00 0.31 2.15 100.0 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 4622.00 3.26 22.80 100.0 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 794.00 0.56 3.92 100.0 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 2745.00 72.10 13.54 100.0 SNORD114-9-201 snoRNA spleen (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 638.00 16.76 3.15 100.0 SNORD114-9-201 snoRNA spleen (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 780.00 4.46 3.85 100.0 Y_RNA.234-201 misc RNA spleen (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 62.00 5.06 0.31 100.0 RNA5SP141-201 rRNA pseudogene spleen (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 137.00 82.53 0.68 100.0 SNORD114-15-201 snoRNA spleen (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 68.00 13.79 0.34 100.0 ENST00000364722 snoRNA spleen (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 75.00 40.11 0.37 100.0 SNORD113-3-201 snoRNA spleen (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 7749.00 80.30 38.23 100.0 SNORD52-201 snoRNA spleen (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 7.00 0.41 0.03 100.0 SNORD117-201 snoRNA spleen (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 12.00 0.80 0.06 100.0 SNORD114-3-201 snoRNA spleen (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 455.00 30.23 2.24 100.0 SNORD114-3-201 snoRNA spleen (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 849.00 56.41 4.19 100.0 SNORD114-3-201 snoRNA spleen (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 10.00 1.98 0.05 100.0 RNA5SP298-201 rRNA pseudogene spleen (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 435.00 75.92 2.15 100.0 SNORD113-9-201 snoRNA spleen (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 46618.00 88.30 229.98 100.0 SNORD38A-201 snoRNA spleen (Tissue)