ENCFF400GBK

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR587CPE
Description: Part of ENCODE experiment ENCSR587CPE. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 255.00 0.06 1.26 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 6665.00 1.53 32.88 89.33 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 149.00 0.03 0.74 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 1409.00 0.32 6.95 94.69 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 51951.00 11.95 256.29 42.71 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 66.00 0.02 0.33 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 542.00 89.44 2.67 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 142.00 0.01 0.70 93.42 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 403.00 23.83 1.99 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 422.00 24.96 2.08 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 161.00 8.41 0.79 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 183.00 1.23 0.90 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 15.00 0.00 0.07 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 214.00 0.02 1.06 19.74 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 3705.00 37.92 18.28 59.59 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 3711.00 37.98 18.31 50.04 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 59.00 2.43 0.29 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 600.00 0.14 2.96 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 300665.00 69.19 1483.28 91.08 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 1835.00 53.95 9.05 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 46.00 5.68 0.23 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 1366.00 1.72 6.74 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 521.00 4.97 2.57 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 107.00 1.02 0.53 23.83 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 46.00 0.44 0.23 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spleen (Tissue)