ENCFF400GBK

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR587CPE
Description: Part of ENCODE experiment ENCSR587CPE. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 26661.05 57.21 131.53 60.33 MIR182-201 miRNA spleen (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 651.00 82.30 3.21 86.0 MIR100-201 miRNA spleen (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 122.00 92.42 0.60 100.0 MIR301A-201 miRNA spleen (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 3707.00 93.14 18.29 97.12 MIR130A-201 miRNA spleen (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 250.00 6.28 1.23 44.33 MIR130A-201 miRNA spleen (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 295792.00 97.39 1459.24 98.05 MIRLET7F2-201 miRNA spleen (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 231.00 67.94 1.14 100.0 MIR652-201 miRNA spleen (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 1402.00 59.28 6.92 100.0 MIR140-201 miRNA spleen (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 25.00 2.68 0.12 100.0 MIR106B-201 miRNA spleen (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 330.00 35.41 1.63 55.09 MIR106B-201 miRNA spleen (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 552.00 65.87 2.72 100.0 SNORD41-201 snoRNA spleen (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 2149.00 35.57 10.60 71.44 MT-TF-201 Mt tRNA spleen (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 79.00 1.31 0.39 20.57 MT-TF-201 Mt tRNA spleen (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 1350.00 22.35 6.66 100.0 MT-TF-201 Mt tRNA spleen (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 4160.00 64.71 20.52 100.0 MT-TV-201 Mt tRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 49.00 0.23 0.24 100.0 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 3410.00 15.73 16.82 82.17 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 1348.00 6.22 6.65 100.0 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 4280.00 19.75 21.11 88.61 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 19.00 0.09 0.09 100.0 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 110.00 0.51 0.54 100.0 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 109.00 0.50 0.54 100.0 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 952.00 66.20 4.70 98.35 MT-TI-201 Mt tRNA spleen (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 36.00 2.50 0.18 100.0 MT-TI-201 Mt tRNA spleen (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 2258.90 3.94 11.14 7.31 MT-TQ-201 Mt tRNA spleen (Tissue)