ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 377.00 49.74 1.46 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 7529.00 76.10 29.23 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 251.00 0.27 0.97 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 669.00 0.71 2.60 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 260.00 0.28 1.01 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 9706.00 10.30 37.69 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 365.00 0.39 1.42 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 500.00 0.53 1.94 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 11445.00 0.14 44.44 96.59 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 11546.00 0.14 44.83 69.34 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 11112.00 0.14 43.15 71.22 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 8426.00 45.70 32.72 84.23 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 2866.00 83.14 11.13 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 1548.00 30.62 6.01 62.39 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 2411.00 97.26 9.36 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 225.00 0.03 0.87 37.07 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 382.00 0.05 1.48 62.93 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 685780.00 90.92 2662.87 98.39 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 23719.52 53.25 92.10 68.46 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 1654.00 3.71 6.42 32.46 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 13731.72 30.83 53.32 41.2 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 763211.00 93.32 2963.53 98.36 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 295.00 8.06 1.15 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 19378.00 50.82 75.24 79.89 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 219.00 0.02 0.85 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA transverse colon (Tissue)