ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 750.00 1.20 2.91 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 4476.00 7.14 17.38 75.15 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 418.00 0.67 1.62 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 2185.00 5.73 8.48 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 10051.00 26.34 39.03 34.15 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 1369.00 3.68 5.32 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 395.00 0.52 1.53 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 119.00 0.16 0.46 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 628.00 0.83 2.44 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 55591.00 73.61 215.86 84.4 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 532.00 0.70 2.07 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 942.00 2.60 3.66 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 32154.00 59.57 124.85 97.78 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 147.00 0.42 0.57 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 975.00 14.73 3.79 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 214.00 3.23 0.83 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 1132.00 17.10 4.40 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 413.00 6.24 1.60 64.23 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 395.00 0.00 1.53 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 9151.00 55.15 35.53 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 2.00 0.21 0.01 3.39 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 57.00 5.92 0.22 96.61 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 1643.00 14.31 6.38 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 91.00 0.79 0.35 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 171373.00 98.22 665.44 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA transverse colon (Tissue)