ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 1159457.00 84.42 4502.15 92.54 MIR194-2HG-201 lncRNA transverse colon (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 193125.00 14.06 749.90 45.73 MIR194-2HG-201 lncRNA transverse colon (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 23.00 0.27 0.09 100.0 LINC01783-201 lncRNA transverse colon (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 106.00 90.60 0.41 100.0 RPS7P15-201 processed pseudogene transverse colon (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 172.00 3.77 0.67 100.0 SNORD62B-201 snoRNA transverse colon (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 482.00 10.57 1.87 100.0 SNORD62B-201 snoRNA transverse colon (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 1765.00 38.71 6.85 78.58 SNORD62B-201 snoRNA transverse colon (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 109.00 2.39 0.42 100.0 SNORD62B-201 snoRNA transverse colon (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 240.00 5.26 0.93 100.0 SNORD62B-201 snoRNA transverse colon (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 71.00 98.61 0.28 100.0 MRPL32-203 nonsense mediated decay transverse colon (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 102.00 75.00 0.40 100.0 ENST00000436739 lncRNA transverse colon (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 72.00 1.68 0.28 13.21 TMEM107-204 protein coding transverse colon (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 410.00 9.56 1.59 100.0 TMEM107-204 protein coding transverse colon (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 516.00 12.03 2.00 56.33 TMEM107-204 protein coding transverse colon (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 491.00 11.45 1.91 100.0 TMEM107-204 protein coding transverse colon (Tissue)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 171.00 17.15 0.66 100.0 SNHG16-201 lncRNA transverse colon (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 318.00 31.90 1.23 85.95 SNHG16-201 lncRNA transverse colon (Tissue)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 63536.00 85.28 246.71 95.74 SNORD105B-201 snoRNA transverse colon (Tissue)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 675.00 55.42 2.62 86.87 SNORD121B-201 snoRNA transverse colon (Tissue)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 10661.00 94.88 41.40 99.26 SNORD127-201 snoRNA transverse colon (Tissue)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 23.00 0.20 0.09 100.0 SNORD127-201 snoRNA transverse colon (Tissue)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 8999.00 91.67 34.94 100.0 SNORD42B-201 snoRNA transverse colon (Tissue)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 242.00 1.28 0.94 100.0 RNY4P25-201 misc RNA transverse colon (Tissue)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 139.00 59.91 0.54 100.0 SNORD121A-201 snoRNA transverse colon (Tissue)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 654.00 47.95 2.54 77.12 SNORD126-201 snoRNA transverse colon (Tissue)