ENCFF379KTQ

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR003SZJ
Description: Part of ENCODE experiment ENCSR003SZJ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 305.00 5.40 1.38 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 116.00 0.01 0.52 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 785.00 0.04 3.55 86.07 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 359.00 0.02 1.62 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 241.00 0.01 1.09 93.77 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 360010.00 17.19 1628.64 46.29 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 2.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 14.00 0.00 0.06 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 2461.00 76.86 11.13 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 290.00 0.01 1.31 95.39 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 2019.00 29.24 9.13 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 1514.00 21.92 6.85 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 3134.00 30.35 14.18 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 117.00 0.91 0.53 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 114.00 0.00 0.52 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 5261.00 0.10 23.80 22.37 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 2005.00 24.53 9.07 60.08 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 2006.00 24.54 9.07 50.01 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 27.00 0.80 0.12 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 1189.00 0.06 5.38 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 1329076.00 63.48 6012.56 90.06 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 8435.00 42.46 38.16 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 22.00 0.55 0.10 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 249.00 0.63 1.13 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 200.00 0.20 0.90 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)